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A theoretical study of the structure, charge distribution and gas-phase basicity of azaindoles

Identifieur interne : 004001 ( Main/Exploration ); précédent : 004000; suivant : 004002

A theoretical study of the structure, charge distribution and gas-phase basicity of azaindoles

Auteurs : J. Catalán [Espagne] ; O. M [Espagne] ; P. Pérez [Espagne] ; M. Yá Ez [Espagne]

Source :

RBID : ISTEX:38BCCD87C36EFF1CB5CA0BEF061E8CBCA8737B11

Abstract

We have carried out ab initio calculations, using a STO-3G minimal basis set, for indazole, benzimidazole, azaindoles and their tautomeric forms. The structural changes which take place in the exchange of the imino proton are fully analized and explained in terms of hybridization effects, valence-shell electron-pairs repulsions and intramolecular non-bonded interactions. These structural changes affect substantially to the endocyclic bond angles which involved both N's. The structure and the charge distribution of the 5-membered ring of azaindoles is very little affected by the position of the aza N. The dicoordinated nitrogen atom is more negative than the tricoordinated one (with the exception of 1H-indazole). As in indoles, C3 of azaindoles is the C atom with the highest electronic density. The prototropic tautomerism in these species is accompanied by a strong migration of charge from the 6 to the 5-membered ring, which results in a considerable increase of the polarity and the basicity of the corresponding tautomeric forms. The predicted PA's are in good agreement with the experimental evidence. C5 is the most reactive C atom of indazole and benzimidazole, although in the former C3 is almost as active as C5. In azaindoles the most basic C atom is C3. Azaindoles are less reactive than indole toward electrophilic agents. Our predicted PA's for N protonation present differences much smaller than those observed in solution. We propose, as a possible explanation, an influence of the tautomeric forms which are more basic in the gas-phase, and more easy to stabilize in aqueous solution, than the normal ones.

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DOI: 10.1016/S0040-4020(01)82458-3


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<div type="abstract" xml:lang="en">We have carried out ab initio calculations, using a STO-3G minimal basis set, for indazole, benzimidazole, azaindoles and their tautomeric forms. The structural changes which take place in the exchange of the imino proton are fully analized and explained in terms of hybridization effects, valence-shell electron-pairs repulsions and intramolecular non-bonded interactions. These structural changes affect substantially to the endocyclic bond angles which involved both N's. The structure and the charge distribution of the 5-membered ring of azaindoles is very little affected by the position of the aza N. The dicoordinated nitrogen atom is more negative than the tricoordinated one (with the exception of 1H-indazole). As in indoles, C3 of azaindoles is the C atom with the highest electronic density. The prototropic tautomerism in these species is accompanied by a strong migration of charge from the 6 to the 5-membered ring, which results in a considerable increase of the polarity and the basicity of the corresponding tautomeric forms. The predicted PA's are in good agreement with the experimental evidence. C5 is the most reactive C atom of indazole and benzimidazole, although in the former C3 is almost as active as C5. In azaindoles the most basic C atom is C3. Azaindoles are less reactive than indole toward electrophilic agents. Our predicted PA's for N protonation present differences much smaller than those observed in solution. We propose, as a possible explanation, an influence of the tautomeric forms which are more basic in the gas-phase, and more easy to stabilize in aqueous solution, than the normal ones.</div>
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